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@GMOD

Generic Model Organism Database Project

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  1. Chado Chado Public

    the GMOD database schema

    PLpgSQL 47 22

  2. jbrowse-components jbrowse-components Public

    Source code for JBrowse 2, a modern React-based genome browser

    TypeScript 297 88

  3. jbrowse jbrowse Public

    JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.

    JavaScript 474 199

  4. Apollo Apollo Public

    Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.

    Groovy 141 86

Repositories

Showing 10 of 142 repositories
  • jbrowse-plugin-list Public

    List of plugins for the JBrowse 2 plugin store.

    GMOD/jbrowse-plugin-list's past year of commit activity
    TypeScript 3 5 0 0 Updated Oct 22, 2026
  • jbrowse-plugin-protein3d Public

    3D protein structure visualizer in jbrowse 2 - WIP

    GMOD/jbrowse-plugin-protein3d's past year of commit activity
    TypeScript 1 0 6 0 Updated Oct 22, 2026
  • Apollo3 Public

    Monorepo for Apollo 3 server-side and client-side (JBrowse 2 plugin) components.

    GMOD/Apollo3's past year of commit activity
    TypeScript 17 Apache-2.0 13 59 6 Updated Oct 22, 2026
  • jb2hubs Public

    Source code for the JBrowse 2 genome hubs webite and data processing scripts

    GMOD/jb2hubs's past year of commit activity
    TypeScript 0 0 5 1 Updated Oct 21, 2026
  • jbrowse-plugin-graphgenomeviewer Public
    GMOD/jbrowse-plugin-graphgenomeviewer's past year of commit activity
    TypeScript 1 GPL-3.0 0 0 0 Updated Oct 21, 2026
  • BandageJS Public

    Bandage-style GFA graph viewer in the browser, a thin page over jbrowse-plugin-graphgenomeviewer's core

    GMOD/BandageJS's past year of commit activity
    TypeScript 2 GPL-3.0 0 0 0 Updated Oct 21, 2026
  • ggbandage Public

    Pangenome graph figures as ggplot2 layers, laid out by the Bandage engine from @jbrowse/bandage-core

    GMOD/ggbandage's past year of commit activity
    R 8 0 0 0 Updated Oct 21, 2026
  • bandage-core Public

    Pangenome graph layout and drawing core utils: GFA in, the Bandage force-directed engine and reference-anchored layouts, a Canvas2D renderer out

    GMOD/bandage-core's past year of commit activity
    TypeScript 1 GPL-3.0 0 0 0 Updated Oct 21, 2026
  • graph-walks Public

    Read gfa-to-tabix walk files by range requests and cut a window of a pangenome graph

    GMOD/graph-walks's past year of commit activity
    TypeScript 0 MIT 0 0 0 Updated Oct 21, 2026
  • jbrowse-components Public

    Source code for JBrowse 2, a modern React-based genome browser

    GMOD/jbrowse-components's past year of commit activity
    TypeScript 297 Apache-2.0 88 53 2 Updated Oct 21, 2026
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